Customs & Compliance

Why Is My Shipment Held at Customs and What Do I Do?

DE-BLINGS Editorial Team·Customs & Compliance Desk·May 2, 2026·6 min read

Why Is My Shipment Held at Customs and What Do I Do?

Your tracking says "held at customs" or your agent reports a query. Now what? A hold does not mean your goods are lost, but every day without action adds cost and risk.

This troubleshooting guide explains the most common reasons a shipment is held at customs in Nigeria, what each hold means, and exactly what to do to get your goods released.

For what happens if a hold drags on, storage, demurrage, overtime cargo and auction, read what happens if my shipment gets stuck in customs.

Key takeaways

  • Get the exact hold reason, stage and deadline in writing first.
  • Most holds involve documents, valuation, classification, examination, permits or unpaid charges.
  • Each hold type has a clear fix and needs specific evidence.
  • Pay valid charges early and act fast to limit storage and demurrage.

First: get the facts

Before acting, ask your clearing agent or forwarder for:

  • The exact reason for the hold, in writing.
  • The stage, manifest, assessment, payment, examination, release or exit.
  • The Customs or agency office involved.
  • Deadlines for response.
  • Current storage and demurrage position, when free days end.

Vague answers such as "Customs is delaying it" are not enough. You need specifics to fix the problem.

Hold reason 1: Missing or invalid documents

What it means: Customs cannot process your declaration because something is absent or incorrect, Form M, PAAR, invoice, bill of lading, certificate of origin or insurance.

What to do:

1. Identify the exact document. 2. Get it from your supplier, bank, insurer or carrier immediately. 3. If Form M details are wrong, work with your bank on amendments. 4. Resubmit through your agent.

Prevention: see documents customs needs from you.

Hold reason 2: Valuation query

What it means: Customs believes the declared value is too low compared with reference values or similar imports.

What to do:

1. Provide proof of the real transaction value: supplier invoice, contract, purchase order, bank transfer records. 2. Provide supplier price lists or catalogues. 3. If Customs issues an uplift, review whether it is justified. 4. Pay any valid additional duty to stop charges growing, and pursue review through proper channels if you disagree.

Hold reason 3: Classification query (HS code)

What it means: Customs thinks your goods belong under a different HS code, often with a higher duty rate or extra requirements.

What to do:

1. Provide technical data sheets, product photos and specifications. 2. Ask your agent to explain the basis for the correct classification. 3. Accept reclassification if Customs is right; pay the difference. 4. Correct your HS code for future shipments.

Hold reason 4: Selected for examination

What it means: your cargo must be scanned or physically examined.

What to do:

1. Make sure your agent books and attends the examination promptly. 2. Provide a detailed packing list.

3. Keep product documents ready for questions. 4. Monitor positioning at the terminal, this is often the slow part.

Read what happens during customs inspection.

Hold reason 5: Missing regulatory permit

What it means: your goods need approval from another agency, SON, NAFDAC, NAQS, NESREA or others, before release.

What to do:

1. Confirm exactly which permit is needed. 2. Apply immediately, including through the National Single Window where available. 3. Provide product test reports or certificates required. 4. Ask whether goods can be moved to approved storage while waiting, to reduce costs.

Hold reason 6: Discrepancy found during examination

What it means: goods differ from the declaration, different quantity, model, product or additional undeclared items.

What to do:

1. Get the examination report. 2. Establish the cause: supplier error, packing mistake or declaration error. 3. Amend the declaration and pay any additional duty (debit note). 4. Get written confirmation from your supplier if they shipped the wrong goods, this supports your case and any cost recovery.

Serious misdeclaration can lead to seizure and penalties under the Nigeria Customs Service Act 2023.

Hold reason 7: Restricted or prohibited goods

What it means: your goods are on a prohibition or restriction list.

What to do:

  • Restricted goods: obtain the required licence or end-user certificate.
  • Prohibited goods: seek professional advice immediately. Options may be very limited, and seizure is likely.

Check prohibited and restricted items before your next order.

Hold reason 8: Unpaid duty or charges

What it means: duty has been assessed but not paid, payment has not reflected, or shipping line or terminal charges are outstanding.

What to do:

1. Confirm payment status on the Customs platform. 2. Provide payment evidence to your agent. 3. Settle terminal and shipping line charges. 4. Obtain delivery order and release documents.

Hold reason 9: System or manifest issues

What it means: the carrier's manifest does not match your bill of lading, or data did not transmit properly during system changes.

What to do:

1. Ask the shipping line or airline to correct the manifest.

2. Get your agent to raise a support request with the relevant Customs command. 3. Keep screenshots and reference numbers.

Quick-reference: hold troubleshooting table

Hold reasonWho can fix itKey evidence
Missing documentsImporter, supplier, bankThe missing document
Valuation queryImporter and agentInvoice, contract, bank records
Classification queryAgentTechnical specs, product photos
ExaminationAgent and terminalPacking list, product info
Missing permitImporter and regulatorPermit application, test reports
DiscrepancyImporter, supplier, agentExamination report, supplier letter
Restricted goodsImporter and authorityLicence or end-user certificate
Unpaid chargesImporterPayment receipts
Manifest errorCarrier and agentCorrected manifest

How to reduce the cost of a customs hold

  • Act within hours, not days.
  • Ask shipping lines about free-time extensions or waivers where delays were not your fault.
  • Pay valid charges early to stop daily costs rising.
  • Keep all correspondence for recovery claims against suppliers.
  • Escalate professionally when timelines stall.

Frequently asked questions

How long can Customs hold my shipment?

It depends on the reason. Simple document issues can be fixed in days; permits and disputes can take weeks. Watch storage costs and the 120−day overtime window.

Can I pay Customs to release goods faster?

Only official duties, levies and fees should be paid, through official channels. Unofficial payments create serious legal risk.

Will a customs hold affect my future shipments?

Repeated compliance issues can increase your risk profile and examination rates. Fixing root causes matters.

What if my agent is not responding?

Escalate in writing, request all documents and reference numbers, and consider bringing in an experienced forwarder.

Held at customs? Talk to us first

DE-BLINGS resolves customs holds every day using deep customs relationships and fast, documented responses. Book a free consultation or learn about our customs clearance service.

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